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“So what does the Global Plant Council actually do?” – SEB Prague 2015

By | ASPB, Blog, GPC Community, Scientific Meetings, SEB

Dobrý den!

 View across the Vltava river of Prague's Old Town and the Charles Bridge.


View across the Vltava river of Prague’s Old Town and the Charles Bridge.

Last week I attended the Society for Experimental Biology (SEB)’s Annual Main Meeting in the wonderful city of Prague in the Czech Republic.

Armed with a banner, a new batch of hot-off-the-press leaflets, some of our infamous GPC recycled paper pens, and a map of the world, the purpose of my trip was to staff an exhibitor’s booth at the conference to help raise awareness of the GPC and the projects and initiatives we are involved with.

2015-07-03 09.50.14To encourage delegates to speak to the exhibitors, there was a chance to win prizes in exchange for a ‘passport’ filled with stickers or stamps collected from each of the booths. This gave me a fantastic opportunity to meet people from all over the world and tell them about the Global Plant Council – even the SEB’s Animal and Cell biologists!

Many visitors to the booth were from Europe, but I also met people from as far away as Argentina, Australia, China and Vietnam. Thanks to everyone who visited the booth and gave me their email addresses to sign up for our monthly e-Bulletin newsletter!

“So what does the Global Plant Council actually do?”

This was the question I was most frequently asked at the conference. The answer is: many things! But to simplify matters, our overall remit falls into two main areas.

1) Enabling better plant science

2015-07-03 09.50.39

Visitors to our booth at SEB 2015 were asked to put their plant science on the map!

Plant science has a critical role to play in meeting global challenges such as food security, hunger and malnutrition. The GPC currently has 29 member organizations, including the SEB, representing over 55,000 plant, crop, agricultural and environmental scientists around the world. By bringing these professional organizations together under a united global banner, we have a stronger voice to help influence and shape policy and decision-making at the global level.  Our Executive Board and member organization representatives meet regularly and feed into international discussions and consultations.

The GPC also aims to facilitate more effective and efficient plant-based scientific research. Practically speaking, this means we organize, promote, provide support for, and assist with internationally collaborative projects and events. A good example is the Stress Resilience Symposium and Discussion Forum we are hosting, together with the SEB, in Brazil in October.

This meeting – which will be a satellite meeting of the International Plant Molecular Biology 2015 conference – will bring together scientists from across the world who are studying the mechanisms by which plants interact with and respond to their environments, particularly in the face of climate change. It will provide an excellent opportunity for researchers of all levels and from different regions to network and learn from each other, fostering new relationships and collaborations across borders. Registration and abstract submission is now open, so why not come along!

Importantly, as well as learning from researchers all over the world about the fantastic research they are doing, we also want to identify important research that is not being done, or which could be done better. Then, we can come together to discuss strategies to fund and fill these gaps.

You can find out more about our other current initiatives by going to our website.

2) Enabling better plant scientists

2015-07-03 12.42.41As well as physically bringing people together at meetings and events, the Global Plant Council aims to better connect plant scientists from around the world, promote plant research and funding opportunities, share knowledge and best practice, and identify reports, research tools, and educational resources.

Plant scientists have created an amazing diversity of assets for research and education, so by facilitating access to and encouraging use of these resources, we hope that a desperately needed new generation of plant researchers will be inspired to continue working towards alleviating some of the world’s most pressing problems. For example, we’re translating plant science teaching materials into languages other than English, and are helping the American Society of Plant Biologists to curate content for Plantae.org, an online resource hub and gathering place for the plant science community that will be launched later this year – stay tuned!

My #SEBSelfie! Other updates from the meeting can be found by following the hashtag #SEBAMM on Twitter.

My #SEBSelfie! Other updates from the meeting can be found by following the hashtag #SEBAMM on Twitter.

In addition, the GPC website is full of useful information including research and funding news, an events calendar, reports and white papers, fellowships and awards. We operate a Twitter account (@GlobalPlantGPC) for up-to-the-minute news and views, and a Spanish version @GPC_EnEspanol. We also have a blog (obviously!) that is regularly updated with interesting and informative articles written by the GPC staff, our two New Media Fellows, and plant scientists from across our member network. A Facebook page will be coming soon!

If you would like any more information about the projects and initiatives mentioned here, or more details about the GPC’s work, please do contact me (Lisa Martin, Outreach & Communications Manager): lisa@globalplantcouncil.org.

 

Increasing Food Production in a Changing World

By | Blog, Global Change

The fifth report of the International Panel on Climate Change (IPCC) published last year announced that climate change is already negatively affecting our food supply and this problem is only going to be amplified in coming decades.

Our climate is projected to warm by 5ºC by 2050, with increased incidence of extreme weather events. Coinciding with this is a rapidly rising global population, predicted to reach 9.6 billion by 2050. Feeding all these extra mouths is challenge enough. Doing this under changing weather and climate conditions becomes even more difficult.

Food shortages resulting from population growth or unusual weather events can lead to rising food prices and political instability. A global rice shortage in 2008 saw prices rise by over 50%, resulting in riots in Asia and Africa. We might expect events such as this to become more common in the future as the food supply becomes more and more affected by climate change.

Not surprisingly food security is currently a buzz word in the research community, and many resources are being poured into trying to ensure a stable food supply for future generations.

Some climate skeptics argue that increases in carbon dioxide could boost plant growth, resulting in higher yielding plants under climate change. However, the reality is that any positive effect the increased CO2 could have on plant growth is likely to be outweighed by higher temperatures and extreme weather events.

Since the IPCC report there have been a number of studies focussed on the staple food crop wheat, and how yields could be affected in the future.

Wheat

Wheat was first domesticated 10,000 years ago and is now grown more widely than any other crop. Photo by jayneandd used under CC BY 2.0.

Wheat yields are sensitive to temperature, and are predicted to fall by around 6% for every 1ºC rise in temperature. If we do not cut down current emissions, the earth could warm by 5ºC by 2050, equating to a 30% reduction in wheat yields due to temperature increases alone.

This 30% reduction in yield is only the tip of the iceberg. Yields could be further reduced by increased instances of disease epidemics. For example, Fusarium Ear Blight is a wheat disease that causes spikelet bleaching and enhanced senescence. A severe epidemic can wipe out 60% of a wheat crop. In order to take effect, the disease requires wet weather at flowering, something which we can expect to happen more often in the future according to climate models.

Extreme weather events, such as flooding, are predicted to increase over the coming decades, and will cause unavoidable crop losses. This will exacerbate problems with declining yields, further increasing the difficulty of feeding a growing population.

What can we do?

Primarily, we should be trying to limit the extent of climate change, and to do so we need to act now. Reducing emissions and moving to sustainable energy sources should be at the top of the agenda.  However, most climate scientists agree that even if we act now to reduce our emissions, there will be at least 2ºC of warming, which is already impacting on food production.

We therefore need to make our food sources more resilient to climate change. In terms of wheat this means breeding varieties that are tolerant to higher temperatures and diseases. Additionally, we will need to adapt our farming methods, to be more intensive yet sustainable, and perhaps alter our diets.

Stress Resilience Forum, 23–25 October, Iguassu Falls, Brazil

In October the Global Plant Council, in collaboration with the Society of Experimental Biology, will bring together experts from around the world to discuss current research efforts in plant stress resilience. Abstract submission and registration for the Stress Resilience Forum is now open, and we welcome researchers at all levels to take part.

The meeting takes place immediately before the International Plant Molecular Biology Conference (25–30 October), also at Iguassu Falls, and which also includes several scientific sessions on plant stresses.

Can you crowdfund the sequencing of a plant genome?

By | Blog, Future Directions, Global Change
Dr Peng Jiang, University of Georgia, USA

Dr Peng Jiang, University of Georgia, USA

Peng Jiang and Hui Guo at the University of Georgia think you can! They are currently raising money via a crowdfunding approach to sequence the first cactus genome – but the question is: why would they want to? Peng explains all in this guest blog post.

A Prickly Proposal: Why Sequence the Cactus?
In these times of growing food insecurity due to climate change and population pressures, the prickly pear cactus (Opuntia ficus) has growing commercial and agricultural importance across much of the world – you will find it growing in Mexico and Brazil, Chile, large parts of India and South Africa, and in Spain and Morocco.

The goal of our proposal is to sequence the genome and transcriptome of the prickly pear cactus, a recognized food and forage crop in these challenging semiarid regions of the world.

With more than 130 genera and 1,500 species of Cactaceae, we will create a draft genomic and transcriptome database that would aid the understanding of this understudied plant family, and provide the research community with valuable resources for molecular breeding and genetic manipulation purposes. Here are some of the reasons why we think a first cactus genome would be so important:

The Prickly Pear Cactus

The Prickly Pear Cactus

1. Ecological Improvement
The beauty of the drought-tolerance cactus is that it can grow on desert-like wastelands. Nowadays, more than 35% of the earth’s surface is arid or semiarid, making it inadequate for most agricultural uses. Without efforts to curb global warming, “Thermageddon” may hit in 30–40 years time, causing desertification of the US, such that it may become like the Sahara. Opuntia helps create a vegetative cover, which improves soil regeneration and rainfall infiltration into the soil. This cactus genome research may help us to adapt our food crops to a much hotter, drier climate.

2. Food Crops, Feed and Medicine
The fruits of prickly pear cactus are edible and sold in stores under the name “tuna”. Prickly pear nectar is made with the juice and pulp of the fruits. The pads of prickly pears (“Nopalito”) are also eaten as a vegetable. Both the fruits and pads of prickly pears can help keep blood sugar levels stable because they contain rich, soluble fibers. The fruit contains vitamin C and was used as an early cure for scurvy.

Furthermore, there has been much medical interest in the prickly pear plant. Studies [1, 2, 3] have shown that the pectin contained in prickly pear pulp lowers cholesterol levels. Another study [4] found that the fibrous pectin in the fruit may lower a diabetic’s need for insulin. The plant also contains the antioxidant flavonoids quercetin, (+)-dihydroquercetin (taxifolin), quercetin 3-methyl ether (isorhamnetin) and kaempferol, which have a protective function against the DNA damage that leads to cancer.

3. Biofuels in Semiarid Regions
Planting low water use, Crassulacean acid metabolism (CAM; a water saving mode of photosynthesis) biofuel feedstocks on arid and semiarid lands could offer immediate and sustained biogas advantages. Opuntiapads have 8–12% dry matter, which is ideal for anaerobic digestion. With an arid climate, this prevents the need for extra irrigation or water to facilitate the anaerobic digestion process. Requiring only 300 mm of precipitation per year, Opuntiacan produce a large amount of dry matter feedstock and still retain enough moisture to facilitate biogas production. It’s possible to get as much as 2.5 kWh of methane from 1 kg of dry Opuntia.

4. Phylogenetic Importance
Trained botanists and amateurs alike have held cacti in high regard for centuries. The copious production of spines, lack of leaves, bizarre architecture and impressive ability to persist in the harshest environments on Earth are all traits that have entitled this lineage to be named a true wonder of the plant world.

The cacti are one of the most celebrated radiations of succulent plants. There has been much speculation about their age, but progress in dating cactus origins has been hindered by the lack of fossil data for cacti or their close relatives. Through whole genome sequencing, we help will reveal the genomic evolution of Opuntia by comparing this genome with that of other sequenced plant species.

Cacti are typical CAM plants. We will analyse the evolution of CAM genes in the cactus to help reveal the secret of drought tolerance. Furthermore, plant architecture genes and MADS-box gene family members will be analysed to reveal the specific architecture and structure of cactus.

Crowdfunding the Cactus Genome Project
Cactus has several fascinating aspects that are worth exploring, not just for its biology, but also its relevance to humanity and the global environment. We plan to generate a draft genome for Opuntia, and have launched a crowdfunding campaign to help fund this project – we have already raised $2300 USD (46% of what we need), but we only have 15 days to raise the rest. If you would like to help fund this project, please visit our Experiment page at: https://experiment.com/projects/sequencing-the-cactus-genome-to-discover-the-secret-of-drought-resistance.

If we are successful in raising enough money to initiate the Cactus Genome Project, not only will this be the first plant genome to be sequenced in the Cactaceae family, we will be releasing the results to the plant science community through GeneGarden, an ornamental plant genome database. Our citizen science approach is also allowing us to reach out directly to members of the public, creating exciting opportunities for outreach and engagement with plant science.

If you have any further questions, please contact project leader Dr Peng Jiang at pjiang@uga.edu.

This blog post is slightly adapted from a post originally appearing on GigaScience Journal’s GigaBlog. Reproduced and adapted with permission, under a CC-BY license.

References

  1. Wolfram RM, Kritz H, Efthimiou Y, et al. Effect of prickly pear (Opuntia robusta) on glucose- and lipid-metabolism in non-diabetics with hyperlipidemia – a pilot study. Wien Klin Wochenscr. 2002;114(19–20):840–6.
  2. Trejo-Gonzalez A, Gabriel-Ortiz G, Puebla-Perez AM, et al. A purified extract from prickly pear cactus (Opuntia fulignosa) controls experimentally induced diabetes in rats. J Ethnopharmacol. 1996;55(1):27–33.
  3. Fernandez ML, Lin EC, Trejo A, et al. Prickly pear (Opuntia sp.) pectin alters hepatic cholesterol metabolism without affecting cholesterol absorption in guinea pigs fed a hypercholesterolemic diet. J Nutr. 1994;124(6):817–24.
  4. Frati-Munari AC, Gordillo BE, Altamirano P, et al. Hypoglycemic effect of Opuntia streptacantha Lemaire in NIDDM. Diabetes Care. 1988:11(1):63–66.